Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5E93_12645 | Not Available | Negative | 2602552 - 2602743 | 7269.67 |
| glutamate--cysteine ligase | E5E93_12650 | Not Available | Positive | 2602818 - 2603936 | 41661.6 |
| duf1158 domain-containing protein | E5E93_12655 | Not Available | Positive | 2604002 - 2604250 | 9403.99 |
| oxygen-insensitive nad(p)h nitroreductase | E5E93_12665 | Not Available | Positive | 2604778 - 2605431 | 23860.3 |
| mechanosensitive ion channel | E5E93_12670 | Not Available | Positive | 2605689 - 2606936 | 46631.5 |
| aromatic amino acid transporter arop | E5E93_12675 | Not Available | Negative | 2607003 - 2608379 | 50648.3 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | E5E93_12690 | Not Available | Negative | 2612877 - 2613209 | 12309.9 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | E5E93_12695 | Not Available | Negative | 2613233 - 2614615 | 50713.9 |
| copper response regulator transcription factor cusr | E5E93_12700 | Not Available | Positive | 2614772 - 2615455 | 25396.1 |
| phage receptor | E5E93_12715 | Not Available | Positive | 2619261 - 2622233 | 111390.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





