Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | E5E93_23520 | Not Available | Negative | 4801970 - 4803837 | 67263.5 |
| Injection protein | E5E93_23525 | Not Available | Negative | 4803837 - 4805201 | 48173.2 |
| Injection protein | E5E93_23530 | Not Available | Negative | 4805212 - 4805904 | 23673.7 |
| Head assembly protein | E5E93_23535 | Not Available | Negative | 4805907 - 4806362 | 17396.9 |
| Tail accessory protein | E5E93_23540 | Not Available | Negative | 4806362 - 4807315 | 33945.4 |
| Dna stabilization protein | E5E93_23545 | Not Available | Negative | 4807315 - 4808733 | 52282.8 |
| Dna stabilization protein | E5E93_23550 | Not Available | Negative | 4808743 - 4809204 | 16623.7 |
| Hypothetical protein | E5E93_23555 | Not Available | Negative | 4809185 - 4809373 | 6960.26 |
| Coat protein | E5E93_23560 | Not Available | Negative | 4809415 - 4810668 | 44699.1 |
| Capsid and scaffold protein | E5E93_23565 | Not Available | Negative | 4810687 - 4811580 | 33641.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





