Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid:lipid a palmitoyltransferase | E5E93_12420 | Not Available | Negative | 2554192 - 2554752 | 21742.6 |
| anaerobic c4-dicarboxylate transporter dcuc | E5E93_12425 | Not Available | Positive | 2555337 - 2556722 | 48445.3 |
| two-component response regulator dpia | E5E93_12430 | Not Available | Negative | 2556763 - 2557443 | 25454.9 |
| [citrate (pro-3s)-lyase] ligase | E5E93_12440 | Not Available | Positive | 2559453 - 2560511 | 40093.5 |
| citrate lyase acyl carrier protein | E5E93_12445 | Not Available | Positive | 2560526 - 2560822 | 10689.9 |
| citrate (pro-3s)-lyase subunit beta | E5E93_12450 | Not Available | Positive | 2560819 - 2561727 | 33111.6 |
| citrate lyase subunit alpha | E5E93_12455 | Not Available | Positive | 2561738 - 2563270 | 55194.0 |
| citrate lyase holo-[acyl-carrier protein] synthase | E5E93_12460 | Not Available | Positive | 2563274 - 2563825 | 20271.5 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | E5E93_12465 | Not Available | Positive | 2563800 - 2564678 | 31646.4 |
| citrate/succinate antiporter citt | E5E93_12470 | Not Available | Positive | 2564729 - 2566192 | 53095.7 |
Pathways
12862 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





