Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endolytic peptidoglycan transglycosylase rlpa | E5E93_12370 | Not Available | Positive | 2546115 - 2547203 | 37484.1 |
| d-alanyl-d-alanine carboxypeptidase daca | E5E93_12375 | Not Available | Positive | 2547343 - 2548554 | 44446.5 |
| duf493 family protein | E5E93_12380 | Not Available | Positive | 2548666 - 2548929 | 9827.92 |
| lipoyl(octanoyl) transferase lipb | E5E93_12385 | Not Available | Positive | 2549030 - 2549671 | 23884.0 |
| dna-binding transcriptional regulator | E5E93_12390 | Not Available | Positive | 2549930 - 2550883 | 35962.5 |
| lipoyl synthase | E5E93_12395 | Not Available | Positive | 2551092 - 2552057 | 36073.8 |
| twin-arginine translocase subunit tate | E5E93_12400 | Not Available | Negative | 2552158 - 2552361 | 7024.71 |
| deaminated glutathione amidase | E5E93_12405 | Not Available | Negative | 2552490 - 2553278 | 28673.0 |
| fluoride efflux transporter crcb | E5E93_12410 | Not Available | Positive | 2553371 - 2553754 | 13766.1 |
| transcription antiterminator/rna stability regulator cspe | E5E93_12415 | Not Available | Negative | 2553808 - 2554017 | 7463.84 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





