Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine-specific ribonucleoside hydrolase riha | E5E93_12305 | Not Available | Positive | 2533595 - 2534530 | 33884.0 |
| zinc ribbon-containing protein | E5E93_12320 | Not Available | Negative | 2535806 - 2536288 | 18798.2 |
| leucine--trna ligase | E5E93_12325 | Not Available | Positive | 2536523 - 2539105 | 97240.0 |
| lps assembly lipoprotein lpte | E5E93_12330 | Not Available | Positive | 2539120 - 2539701 | 21357.8 |
| dna polymerase iii subunit delta | E5E93_12335 | Not Available | Positive | 2539701 - 2540732 | 38722.0 |
| nicotinate-nucleotide adenylyltransferase | E5E93_12340 | Not Available | Positive | 2540734 - 2541375 | 24529.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | E5E93_12345 | Not Available | Positive | 2541399 - 2542010 | 23434.8 |
| ribosome silencing factor | E5E93_12350 | Not Available | Positive | 2542270 - 2542587 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | E5E93_12355 | Not Available | Positive | 2542591 - 2543058 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | E5E93_12360 | Not Available | Positive | 2543089 - 2544990 | 70860.6 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





