Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system protein tolq | E5E93_11950 | Not Available | Negative | 2458971 - 2459663 | 25599.2 |
| tol-pal system-associated acyl-coa thioesterase | E5E93_11955 | Not Available | Negative | 2459660 - 2460064 | 15562.9 |
| cyd operon protein ybge | E5E93_11960 | Not Available | Negative | 2460214 - 2460507 | 10933.0 |
| cytochrome bd-i oxidase subunit cydx | E5E93_11965 | Not Available | Negative | 2460500 - 2460619 | 4286.11 |
| cytochrome d ubiquinol oxidase subunit ii | E5E93_11970 | Not Available | Negative | 2460634 - 2461773 | 42483.6 |
| cytochrome ubiquinol oxidase subunit i | E5E93_11975 | Not Available | Negative | 2461789 - 2463357 | 58208.4 |
| mannosylglycerate hydrolase | E5E93_11980 | Not Available | Negative | 2464206 - 2466839 | 100143.0 |
| pts 2-o-a-mannosyl-d-glycerate transporter subunit iiabc | E5E93_11985 | Not Available | Negative | 2466857 - 2468833 | 69654.0 |
| gntr family transcriptional regulator | E5E93_11990 | Not Available | Positive | 2468942 - 2469664 | 28248.9 |
| succinate--coa ligase subunit alpha | E5E93_11995 | Not Available | Negative | 2469768 - 2470637 | 29779.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





