Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dethiobiotin synthetase biod | E5E93_11745 | Not Available | Negative | 2422214 - 2422891 | 24092.7 |
| malonyl-acp o-methyltransferase bioc | E5E93_11750 | Not Available | Negative | 2422884 - 2423639 | 28306.0 |
| 8-amino-7-oxononanoate synthase | E5E93_11755 | Not Available | Negative | 2423626 - 2424780 | 41608.7 |
| biotin synthase biob | E5E93_11760 | Not Available | Negative | 2424777 - 2425829 | 39141.9 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | E5E93_11765 | Not Available | Positive | 2425903 - 2427192 | 47329.4 |
| kinase inhibitor | E5E93_11770 | Not Available | Positive | 2427251 - 2427727 | 17072.0 |
| putative acyl-coa thioester hydrolase | E5E93_11775 | Not Available | Positive | 2427879 - 2429162 | 46084.7 |
| hydratase | E5E93_11780 | Not Available | Negative | 2429396 - 2431657 | 81509.2 |
| anion permease | E5E93_11785 | Not Available | Negative | 2431840 - 2433273 | 51353.8 |
| 4-oxalomesaconate tautomerase | E5E93_11790 | Not Available | Negative | 2433349 - 2434401 | 37061.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





