Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-glycosidase ybia | E5E93_11645 | Not Available | Positive | 2402208 - 2402690 | 18685.4 |
| atp-dependent rna helicase rhle | E5E93_11650 | Not Available | Negative | 2402922 - 2404286 | 50022.4 |
| dna-binding transcriptional regulator cecr | E5E93_11655 | Not Available | Positive | 2404515 - 2405186 | 24988.1 |
| secretion protein hlyd | E5E93_11660 | Not Available | Positive | 2405189 - 2406184 | 36286.7 |
| abc transporter atp-binding protein | E5E93_11665 | Not Available | Positive | 2406177 - 2407913 | 63143.4 |
| abc transporter permease | E5E93_11670 | Not Available | Positive | 2407906 - 2409039 | 42062.4 |
| abc transporter permease | E5E93_11675 | Not Available | Positive | 2409050 - 2410156 | 41568.2 |
| hypothetical protein | E5E93_11680 | Not Available | Negative | 2410118 - 2410528 | 15465.6 |
| endonuclease/exonuclease/phosphatase family protein | E5E93_11685 | Not Available | Positive | 2410661 - 2411422 | 28791.4 |
| cardiolipin synthase clsb | E5E93_11690 | Not Available | Positive | 2411419 - 2412660 | 47592.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





