Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybjn domain-containing protein | E5E93_11140 | Not Available | Negative | 2309035 - 2309511 | 17667.1 |
| 30s ribosomal protein s6--l-glutamate ligase | E5E93_11145 | Not Available | Negative | 2309599 - 2310501 | 32408.4 |
| nitroreductase nfsa | E5E93_11150 | Not Available | Negative | 2310562 - 2311284 | 26802.2 |
| duf1418 family protein | E5E93_11155 | Not Available | Negative | 2311268 - 2311555 | 10521.4 |
| grxa family glutaredoxin | E5E93_11160 | Not Available | Positive | 2311715 - 2311972 | 9685.35 |
| hypothetical protein | E5E93_11165 | Not Available | Negative | 2312002 - 2312379 | 14204.0 |
| tetr/acrr family transcriptional regulator | E5E93_11395 | Not Available | Negative | 2347243 - 2347779 | 20339.6 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase | E5E93_11405 | Not Available | Positive | 2349073 - 2349888 | 30265.0 |
| hypothetical protein | E5E93_11410 | Not Available | Positive | 2349974 - 2350258 | 10005.2 |
| undecaprenyl-diphosphate phosphatase | E5E93_11420 | Not Available | Positive | 2351817 - 2352413 | 22433.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





