Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter substrate-binding protein | E5E93_11090 | Not Available | Positive | 2299500 - 2300231 | 26931.0 |
| arginine abc transporter permease artq | E5E93_11095 | Not Available | Positive | 2300238 - 2300954 | 26218.7 |
| arginine abc transporter permease artm | E5E93_11100 | Not Available | Positive | 2300954 - 2301622 | 24915.3 |
| arginine abc transporter substrate-binding protein | E5E93_11105 | Not Available | Positive | 2301915 - 2302646 | 26857.9 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | E5E93_11110 | Not Available | Negative | 2302821 - 2303948 | 41981.1 |
| duf2593 family protein | E5E93_11115 | Not Available | Negative | 2303989 - 2304477 | 18519.1 |
| putrescine abc transporter permease poti | E5E93_11120 | Not Available | Negative | 2304537 - 2305382 | 30523.4 |
| spermidine/putrescine abc transporter permease | E5E93_11125 | Not Available | Negative | 2305379 - 2306332 | 35491.6 |
| putrescine abc transporter atp-binding subunit potg | E5E93_11130 | Not Available | Negative | 2306342 - 2307475 | 42135.6 |
| spermidine/putrescine abc transporter substrate-binding protein potf | E5E93_11135 | Not Available | Negative | 2307570 - 2308682 | 40841.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





