Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine abc transporter permease yehw | E5E93_10970 | Not Available | Negative | 2273797 - 2274528 | 25530.1 |
| beta-glucosidase bglx | E5E93_10990 | Not Available | Negative | 2277784 - 2280081 | 83464.7 |
| d-lactate dehydrogenase | E5E93_10995 | Not Available | Positive | 2280277 - 2281992 | 64666.0 |
| d-alanyl-d-alanine endopeptidase | E5E93_11000 | Not Available | Negative | 2282031 - 2282963 | 33875.3 |
| yip1 family protein | E5E93_11005 | Not Available | Negative | 2283137 - 2283724 | 21692.0 |
| deda family protein | E5E93_11010 | Not Available | Positive | 2283894 - 2284472 | 21432.9 |
| sdr family oxidoreductase | E5E93_11015 | Not Available | Negative | 2284602 - 2285363 | 26983.4 |
| multidrug resistance outer membrane protein mdtq | E5E93_11020 | Not Available | Negative | 2285416 - 2286852 | 52198.0 |
| protein yohp | E5E93_11025 | Not Available | Positive | 2287076 - 2287159 | 3092.28 |
| l-lysine exporter lyso | E5E93_11035 | Not Available | Positive | 2287631 - 2288530 | 32342.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





