Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail completion protein r | E5E93_21475 | Not Available | Negative | 4425640 - 4426119 | 17907.2 |
| Head completion/stabilization protein | E5E93_21480 | Not Available | Negative | 4426116 - 4426568 | 16286.1 |
| Putative terminase endonuclease subunit | E5E93_21485 | Not Available | Negative | 4426568 - 4427380 | 30261.8 |
| Major capsid protein, p2 family | E5E93_21490 | Not Available | Negative | 4427390 - 4428382 | 36185.4 |
| Capsid-scaffolding protein | E5E93_21495 | Not Available | Negative | 4428420 - 4428713 | 10702.4 |
| Capsid-scaffolding protein | E5E93_21500 | Not Available | Negative | 4428757 - 4429266 | 18890.3 |
| Putative terminase atpase subunit | E5E93_21505 | Not Available | Positive | 4429420 - 4431191 | 65899.1 |
| hypothetical | E5E93_21510 | Not Available | Positive | 4431192 - 4432219 | 38034.8 |
| Hypothetical protein | E5E93_21515 | Not Available | Positive | 4432219 - 4432536 | 11828.7 |
| hypothetical protein | E5E93_21520 | Not Available | Negative | 4432579 - 4432893 | 11927.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





