Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase csda | E5E93_10525 | Not Available | Positive | 2167538 - 2168743 | 43278.6 |
| cysteine desulfurase sulfur acceptor subunit csde | E5E93_10530 | Not Available | Positive | 2168743 - 2169186 | 15941.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | E5E93_10535 | Not Available | Negative | 2169237 - 2170043 | 28535.6 |
| murein transglycosylase a | E5E93_10540 | Not Available | Negative | 2170281 - 2171378 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 2171588 - 2171664 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2171698 - 2171774 | Not Available |
| amin domain-containing protein | E5E93_10555 | Not Available | Negative | 2171848 - 2173101 | 45637.1 |
| amino-acid n-acetyltransferase | E5E93_10560 | Not Available | Positive | 2173333 - 2174664 | 49198.1 |
| exodeoxyribonuclease v subunit alpha | E5E93_10565 | Not Available | Negative | 2174726 - 2176552 | 66837.2 |
| exodeoxyribonuclease v subunit beta | E5E93_10570 | Not Available | Negative | 2176552 - 2180094 | 134079.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





