Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | E5E93_10415 | Not Available | Negative | 2143602 - 2144942 | 48895.4 |
| mfs transporter | E5E93_10420 | Not Available | Negative | 2144944 - 2146296 | 49161.0 |
| flavodoxin | E5E93_10425 | Not Available | Negative | 2146732 - 2147181 | 16291.1 |
| trna pseudouridine(65) synthase truc | E5E93_10430 | Not Available | Negative | 2147199 - 2147981 | 29667.5 |
| yqcc family protein | E5E93_10435 | Not Available | Negative | 2147981 - 2148310 | 12802.2 |
| secy-interacting protein | E5E93_10440 | Not Available | Negative | 2148932 - 2149477 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | E5E93_10445 | Not Available | Positive | 2149545 - 2150393 | 32531.2 |
| nucleotide 5'-monophosphate nucleosidase | E5E93_10450 | Not Available | Positive | 2150505 - 2151869 | 50975.0 |
| haaap family serine/threonine permease | E5E93_10455 | Not Available | Positive | 2152426 - 2153715 | 46909.2 |
| l-serine ammonia-lyase | E5E93_10460 | Not Available | Positive | 2153773 - 2155140 | 48667.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





