Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5E93_10360 | Not Available | Positive | 2129524 - 2129877 | 12432.2 |
| ygcg family protein | E5E93_10365 | Not Available | Positive | 2129874 - 2130776 | 32288.2 |
| phosphopyruvate hydratase | E5E93_10370 | Not Available | Negative | 2130836 - 2132134 | 45657.6 |
| ctp synthase (glutamine hydrolyzing) | E5E93_10375 | Not Available | Negative | 2132222 - 2133859 | 60377.7 |
| nucleoside triphosphate pyrophosphohydrolase | E5E93_10380 | Not Available | Negative | 2134087 - 2134878 | 30383.9 |
| endoribonuclease mazf | E5E93_10385 | Not Available | Negative | 2134950 - 2135285 | 12098.7 |
| type ii toxin-antitoxin system antitoxin maze | E5E93_10390 | Not Available | Negative | 2135285 - 2135533 | 9356.24 |
| gtp pyrophosphokinase | E5E93_10395 | Not Available | Negative | 2135611 - 2137845 | 83880.4 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | E5E93_10400 | Not Available | Negative | 2137893 - 2139194 | 48016.0 |
| two-component sensor histidine kinase bara | E5E93_10405 | Not Available | Positive | 2139251 - 2142007 | 102488.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





