Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | E5E93_21425 | Not Available | Negative | 4417914 - 4418447 | 20688.9 |
| Baseplate j/gp47 family protein | E5E93_21430 | Not Available | Negative | 4418444 - 4419628 | 42902.8 |
| Hypothetical protein | E5E93_21435 | Not Available | Negative | 4419621 - 4419956 | 12523.2 |
| Tail tape measure protein | E5E93_21440 | Not Available | Negative | 4419953 - 4422286 | 80297.2 |
| Tail assembly chaperone | E5E93_21445 | Not Available | Negative | 4422471 - 4422731 | 9370.28 |
| M15 family peptidase | E5E93_21450 | Not Available | Negative | 4422781 - 4423121 | 12500.0 |
| Holin | E5E93_21455 | Not Available | Negative | 4423108 - 4423410 | 10427.9 |
| Putative tail tube protein | E5E93_21460 | Not Available | Negative | 4423415 - 4423849 | 15685.5 |
| Putative tail sheath protein | E5E93_21465 | Not Available | Negative | 4423879 - 4425018 | 41943.8 |
| Virion morphogenesis protein | E5E93_21470 | Not Available | Negative | 4425015 - 4425818 | 30527.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





