Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein potd | E5E93_10030 | Not Available | Positive | 2065362 - 2066408 | 38869.1 |
| duf3592 domain-containing protein | E5E93_10035 | Not Available | Positive | 2066466 - 2066927 | 17364.8 |
| tpm domain-containing protein | E5E93_10040 | Not Available | Positive | 2066924 - 2067709 | 28706.4 |
| nad-dependent protein deacylase | E5E93_10045 | Not Available | Negative | 2067846 - 2068667 | 30938.2 |
| n-acetylglucosamine kinase | E5E93_10050 | Not Available | Negative | 2068683 - 2069594 | 33044.6 |
| lipoprotein-releasing abc transporter permease subunit lole | E5E93_10055 | Not Available | Negative | 2069623 - 2070867 | 45323.0 |
| lipoprotein-releasing abc transporter atp-binding protein lold | E5E93_10060 | Not Available | Negative | 2070867 - 2071568 | 25453.9 |
| lipoprotein-releasing abc transporter permease subunit lolc | E5E93_10065 | Not Available | Negative | 2071561 - 2072760 | 43249.5 |
| acyltransferase family protein | E5E93_10070 | Not Available | Positive | 2073022 - 2074095 | 40786.9 |
| l,d-transpeptidase ldtc | E5E93_10080 | Not Available | Positive | 2077817 - 2078776 | 34520.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





