Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase nudj | E5E93_09975 | Not Available | Positive | 2053905 - 2054366 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | E5E93_09980 | Not Available | Positive | 2054420 - 2055526 | 40961.7 |
| high frequency lysogenization protein hfld | E5E93_09985 | Not Available | Positive | 2055562 - 2056203 | 22949.0 |
| adenylosuccinate lyase | E5E93_09990 | Not Available | Positive | 2056207 - 2057577 | 51529.7 |
| two-component system response regulator phop | E5E93_09995 | Not Available | Positive | 2057745 - 2058416 | 25536.7 |
| two-component system sensor histidine kinase phoq | E5E93_10000 | Not Available | Positive | 2058416 - 2059876 | 55332.9 |
| cupin domain-containing protein | E5E93_10005 | Not Available | Positive | 2059952 - 2061073 | 42514.1 |
| peptidase t | E5E93_10010 | Not Available | Negative | 2061122 - 2062348 | 44912.0 |
| spermidine/putrescine abc transporter permease potb | E5E93_10020 | Not Available | Positive | 2063717 - 2064574 | 32210.3 |
| spermidine/putrescine abc transporter permease potc | E5E93_10025 | Not Available | Positive | 2064571 - 2065365 | 29112.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





