Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5E93_09910 | Not Available | Negative | 2044193 - 2044411 | 8255.35 |
| cyclic diguanylate phosphodiesterase | E5E93_09915 | Not Available | Negative | 2044543 - 2046066 | 56828.2 |
| hypothetical protein | E5E93_09920 | Not Available | Negative | 2046398 - 2046646 | 9701.79 |
| two-component-system connector protein ymga | E5E93_09930 | Not Available | Negative | 2047056 - 2047328 | 10345.5 |
| two-component-system connector protein ycgz | E5E93_09935 | Not Available | Negative | 2047371 - 2047607 | 8729.47 |
| helix-turn-helix-type transcriptional regulator | E5E93_09945 | Not Available | Positive | 2049339 - 2050070 | 28266.2 |
| duf1398 domain-containing protein | E5E93_09950 | Not Available | Positive | 2050291 - 2050695 | 15770.0 |
| hypothetical protein | E5E93_09955 | Not Available | Positive | 2050748 - 2050858 | 4216.47 |
| nadp-dependent isocitrate dehydrogenase | E5E93_09965 | Not Available | Negative | 2051819 - 2053069 | 45772.4 |
| 23s rrna pseudouridine(2457) synthase rlue | E5E93_09970 | Not Available | Positive | 2053242 - 2053895 | 24881.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





