Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | E5E93_09615 | Not Available | Negative | 1987225 - 1988034 | 30843.1 |
| sirb family protein | E5E93_09620 | Not Available | Negative | 1988038 - 1988430 | 14641.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | E5E93_09625 | Not Available | Negative | 1988427 - 1989260 | 30976.8 |
| peptide chain release factor 1 | E5E93_09630 | Not Available | Negative | 1989260 - 1990342 | 40519.6 |
| glutamyl-trna reductase | E5E93_09635 | Not Available | Negative | 1990384 - 1991640 | 46309.5 |
| lipoprotein localization protein lolb | E5E93_09640 | Not Available | Positive | 1991854 - 1992477 | 23552.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | E5E93_09645 | Not Available | Positive | 1992477 - 1993328 | 30928.1 |
| ribose-phosphate pyrophosphokinase | E5E93_09650 | Not Available | Positive | 1993479 - 1994426 | 34220.3 |
| c4-dicarboxylic acid transporter daua | E5E93_09655 | Not Available | Positive | 1994551 - 1996230 | 59433.8 |
| stress-induced protein ychh | E5E93_09660 | Not Available | Negative | 1996285 - 1996563 | 10486.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





