Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate/nitrite two-component system sensor histidine kinase narx | E5E93_09555 | Not Available | Positive | 1978269 - 1980065 | 67088.0 |
| two-component system response regulator narl | E5E93_09560 | Not Available | Positive | 1980058 - 1980708 | 23928.3 |
| inverse autotransporter invasin ycho | E5E93_09565 | Not Available | Negative | 1980709 - 1982103 | 52060.5 |
| dsre/f sulfur relay family protein ychn | E5E93_09570 | Not Available | Positive | 1982289 - 1982642 | 12693.5 |
| gamma-glutamylcyclotransferase | E5E93_09575 | Not Available | Negative | 1982686 - 1983381 | 25628.8 |
| putative cation transport regulator chab | E5E93_09580 | Not Available | Negative | 1983539 - 1983769 | 8945.18 |
| sodium-potassium/proton antiporter chaa | E5E93_09585 | Not Available | Positive | 1984039 - 1985139 | 39180.9 |
| small toxic polypeptide ldrb | E5E93_09595 | Not Available | Positive | 1985544 - 1985651 | 3971.95 |
| small toxic polypeptide ldra/ldrc | E5E93_09605 | Not Available | Positive | 1986080 - 1986187 | 3984.01 |
| 3-deoxy-8-phosphooctulonate synthase | E5E93_09610 | Not Available | Negative | 1986335 - 1987189 | 30834.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





