Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator h-ns | E5E93_09485 | Not Available | Positive | 1963617 - 1964030 | 15540.5 |
| two-component system response regulator rssb | E5E93_09495 | Not Available | Negative | 1965273 - 1966298 | 37927.2 |
| patatin-like phospholipase rssa | E5E93_09500 | Not Available | Negative | 1966390 - 1967295 | 33041.0 |
| ychj family protein | E5E93_09505 | Not Available | Positive | 1967408 - 1967866 | 16985.3 |
| formyltetrahydrofolate deformylase | E5E93_09510 | Not Available | Positive | 1967916 - 1968758 | 31952.6 |
| Trna-tyr | Not Available | Not Available | Positive | 1968918 - 1969002 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1969037 - 1969121 | Not Available |
| nitrate reductase molybdenum cofactor assembly chaperone | E5E93_09535 | Not Available | Negative | 1970160 - 1970870 | 26450.3 |
| nitrate reductase subunit alpha | E5E93_09545 | Not Available | Negative | 1972403 - 1976146 | 140480.0 |
| nitrate transporter nark | E5E93_09550 | Not Available | Negative | 1976539 - 1977930 | 49696.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





