Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voltage-gated potassium channel protein | E5E93_09425 | Not Available | Positive | 1948468 - 1949721 | 46080.2 |
| yciy family protein | E5E93_09430 | Not Available | Negative | 1949776 - 1949949 | 7102.81 |
| duf440 family protein | E5E93_09440 | Not Available | Positive | 1951588 - 1951917 | 12687.7 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppf | E5E93_09445 | Not Available | Negative | 1951970 - 1952974 | 37183.8 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppd | E5E93_09450 | Not Available | Negative | 1952971 - 1953984 | 37167.7 |
| oligopeptide abc transporter permease oppb | E5E93_09460 | Not Available | Negative | 1954920 - 1955840 | 33445.3 |
| oligopeptide abc transporter substrate-binding protein oppa | E5E93_09465 | Not Available | Negative | 1955926 - 1957557 | 60979.1 |
| naat family transporter yche | E5E93_09470 | Not Available | Negative | 1958295 - 1958942 | 23488.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | E5E93_09475 | Not Available | Positive | 1959419 - 1962094 | 96132.5 |
| thymidine kinase | E5E93_09480 | Not Available | Negative | 1962396 - 1963013 | 23399.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





