Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | E5E93_09365 | Not Available | Positive | 1940319 - 1941512 | 42985.6 |
| hypothetical protein | E5E93_09375 | Not Available | Positive | 1942701 - 1942880 | 5992.65 |
| ferritin-like domain-containing protein | E5E93_09380 | Not Available | Positive | 1942966 - 1943466 | 18597.2 |
| ferritin-like domain-containing protein | E5E93_09385 | Not Available | Positive | 1943512 - 1944018 | 19025.7 |
| outer membrane protein ompw | E5E93_09390 | Not Available | Negative | 1944079 - 1944717 | 22929.1 |
| upf0259 family protein | E5E93_09400 | Not Available | Positive | 1945074 - 1945817 | 26434.6 |
| septation protein a | E5E93_09405 | Not Available | Positive | 1945847 - 1946386 | 20791.3 |
| acyl-coa thioester hydrolase ycia | E5E93_09410 | Not Available | Positive | 1946491 - 1946889 | 14231.4 |
| tonb system transport protein tonb | E5E93_09415 | Not Available | Negative | 1946929 - 1947648 | 26049.6 |
| ycii family protein | E5E93_09420 | Not Available | Positive | 1947872 - 1948168 | 10602.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





