Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | E5E93_08985 | Not Available | Positive | 1860013 - 1860651 | 23363.3 |
| murein tripeptide amidase mpaa | E5E93_08990 | Not Available | Positive | 1860961 - 1861689 | 26559.4 |
| l-ala-d/l-glu epimerase | E5E93_08995 | Not Available | Negative | 1861664 - 1862629 | 34609.9 |
| thiol peroxidase | E5E93_09000 | Not Available | Positive | 1862748 - 1863254 | 17820.3 |
| transcriptional regulator tyrr | E5E93_09005 | Not Available | Negative | 1863298 - 1864839 | 57657.5 |
| tigr01620 family protein | E5E93_09010 | Not Available | Negative | 1864987 - 1866048 | 39408.5 |
| ycjx family protein | E5E93_09015 | Not Available | Negative | 1866045 - 1867442 | 52613.5 |
| laci family transcriptional regulator | E5E93_09020 | Not Available | Positive | 1867597 - 1868595 | 36233.2 |
| monomeric porin ompg | E5E93_09025 | Not Available | Negative | 1868646 - 1869551 | 34859.9 |
| abc transporter atp-binding protein | E5E93_09030 | Not Available | Negative | 1869596 - 1870678 | 40119.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





