Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail length tape measure protein | E5E93_15420 | Not Available | Positive | 3154042 - 3157108 | 109165.0 |
| Putative minor tail protein | E5E93_15425 | Not Available | Positive | 3157108 - 3157437 | 12530.1 |
| Putative minor tail protein | E5E93_15430 | Not Available | Positive | 3157447 - 3158145 | 25597.9 |
| Tail fiber component | E5E93_15435 | Not Available | Positive | 3158151 - 3158894 | 28359.3 |
| Putative tail component | E5E93_15440 | Not Available | Positive | 3158792 - 3159439 | 22536.3 |
| Host specificity protein | E5E93_15445 | Not Available | Positive | 3159499 - 3162897 | 124469.0 |
| Putative lom-like outer membrane protein | E5E93_15450 | Not Available | Positive | 3162964 - 3163563 | 21765.1 |
| Side tail fiber protein | E5E93_15455 | Not Available | Positive | 3163628 - 3166933 | 115360.0 |
| Tail fiber assembly protein | E5E93_15460 | Not Available | Positive | 3166988 - 3167107 | 4570.51 |
| Recombinase family protein | E5E93_15465 | Not Available | Negative | 3167205 - 3167795 | 21909.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





