Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase large subunit | E5E93_08600 | Not Available | Positive | 1809026 - 1810819 | 66300.1 |
| hydrogenase 1 maturation protease | E5E93_08610 | Not Available | Positive | 1811541 - 1812128 | 21532.7 |
| hydrogenase-1 operon protein hyae | E5E93_08615 | Not Available | Positive | 1812125 - 1812523 | 14966.8 |
| hydrogenase expression/formation protein | E5E93_08620 | Not Available | Positive | 1812542 - 1813378 | 30569.5 |
| cytochrome bd-ii oxidase subunit 1 | E5E93_08625 | Not Available | Positive | 1813512 - 1815056 | 57996.3 |
| cytochrome d ubiquinol oxidase subunit ii | E5E93_08630 | Not Available | Positive | 1815068 - 1816204 | 42427.3 |
| cytochrome bd-ii oxidase subunit cbdx | E5E93_08635 | Not Available | Positive | 1816217 - 1816309 | 3597.68 |
| appa family phytase/histidine-type acid phosphatase | E5E93_08640 | Not Available | Positive | 1816389 - 1817687 | 47062.5 |
| tyrosine-protein kinase | E5E93_08645 | Not Available | Negative | 1817802 - 1819982 | 81246.5 |
| protein-tyrosine-phosphatase etp | E5E93_08650 | Not Available | Negative | 1820002 - 1820448 | 16386.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





