Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome modulation factor | E5E93_08500 | Not Available | Positive | 1791474 - 1791641 | 6507.88 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | E5E93_08505 | Not Available | Negative | 1791711 - 1792229 | 18970.2 |
| lon protease family protein | E5E93_08510 | Not Available | Negative | 1792298 - 1794058 | 65850.4 |
| macrodomain ter protein matp | E5E93_08515 | Not Available | Positive | 1794244 - 1794696 | 17694.4 |
| porin ompa | E5E93_08520 | Not Available | Negative | 1794772 - 1795824 | 37462.1 |
| cell division inhibitor sula | E5E93_08525 | Not Available | Negative | 1796182 - 1796691 | 18802.5 |
| crp-s regulon transcriptional coactivator sxy | E5E93_08530 | Not Available | Positive | 1796910 - 1797539 | 24148.3 |
| tigr01666 family membrane protein | E5E93_08535 | Not Available | Negative | 1797502 - 1799664 | 82021.8 |
| yccf domain-containing protein | E5E93_08540 | Not Available | Negative | 1799674 - 1800120 | 16276.3 |
| dna helicase iv | E5E93_08545 | Not Available | Positive | 1800243 - 1802297 | 77966.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





