Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | E5E93_08435 | Not Available | Positive | 1774977 - 1777577 | 95261.1 |
| fimbrial protein | E5E93_08440 | Not Available | Positive | 1777568 - 1778638 | 37978.9 |
| type 1 fimbrial protein | E5E93_08450 | Not Available | Positive | 1779199 - 1779714 | 18410.9 |
| fimbrial chaperone | E5E93_08455 | Not Available | Positive | 1779707 - 1780417 | 25838.2 |
| quinone-dependent dihydroorotate dehydrogenase | E5E93_08460 | Not Available | Positive | 1780528 - 1781538 | 36776.8 |
| cell division protein zapc | E5E93_08465 | Not Available | Positive | 1781712 - 1782254 | 20589.9 |
| 6-n-hydroxylaminopurine resistance protein ycbx | E5E93_08470 | Not Available | Negative | 1782251 - 1783360 | 40662.6 |
| abc transporter atp-binding protein | E5E93_08480 | Not Available | Positive | 1785722 - 1787629 | 72072.1 |
| intermembrane transport protein pqib | E5E93_08490 | Not Available | Positive | 1789018 - 1790658 | 60524.0 |
| membrane integrity-associated transporter subunit pqic | E5E93_08495 | Not Available | Positive | 1790655 - 1791218 | 20665.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





