Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1701546 - 1701634 | Not Available |
| translation initiation factor if-1 | E5E93_08155 | Not Available | Negative | 1701888 - 1702106 | 8250.1 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | E5E93_08170 | Not Available | Negative | 1704859 - 1706625 | 65046.0 |
| thioredoxin-disulfide reductase | E5E93_08175 | Not Available | Negative | 1706748 - 1707713 | 34625.1 |
| leucine-responsive transcriptional regulator lrp | E5E93_08180 | Not Available | Positive | 1708258 - 1708752 | 18887.9 |
| dna translocase ftsk | E5E93_08185 | Not Available | Positive | 1708887 - 1712798 | 143676.0 |
| outer membrane lipoprotein chaperone lola | E5E93_08190 | Not Available | Positive | 1712953 - 1713564 | 22512.2 |
| replication-associated recombination protein a | E5E93_08195 | Not Available | Positive | 1713575 - 1714918 | 49697.9 |
| serine--trna ligase | E5E93_08200 | Not Available | Positive | 1715009 - 1716301 | 48416.8 |
| dimethylsulfoxide reductase subunit a | E5E93_08205 | Not Available | Positive | 1716540 - 1718984 | 90410.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





