Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5E93_08100 | Not Available | Negative | 1688996 - 1689394 | 14593.6 |
| trna dihydrouridine(16) synthase dusc | E5E93_08105 | Not Available | Positive | 1689633 - 1690583 | 35357.7 |
| aquaporin z | E5E93_08110 | Not Available | Negative | 1690955 - 1691650 | 23703.2 |
| atp-dependent endonuclease | E5E93_08115 | Not Available | Positive | 1692076 - 1693734 | 63560.9 |
| duf535 domain-containing protein | E5E93_08120 | Not Available | Negative | 1693731 - 1694687 | 36951.0 |
| maca family efflux pump subunit | E5E93_08125 | Not Available | Positive | 1694838 - 1695953 | 40656.4 |
| macrolide abc transporter atp-binding protein/permease macb | E5E93_08130 | Not Available | Positive | 1695950 - 1697896 | 70618.8 |
| cold shock-like protein cspd | E5E93_08135 | Not Available | Negative | 1697969 - 1698193 | 7969.41 |
| atp-dependent clp protease adapter clps | E5E93_08140 | Not Available | Positive | 1698516 - 1698836 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | E5E93_08145 | Not Available | Positive | 1698867 - 1701143 | 84211.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





