Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine kinase | E5E93_07965 | Not Available | Positive | 1660646 - 1661587 | 33674.0 |
| pseudouridine-5'-phosphate glycosidase | E5E93_07970 | Not Available | Positive | 1661575 - 1662513 | 33059.0 |
| ribosylpyrimidine nucleosidase | E5E93_07990 | Not Available | Positive | 1664757 - 1665698 | 33732.0 |
| nupc/nupg family nucleoside cnt transporter | E5E93_07995 | Not Available | Positive | 1665798 - 1667048 | 43310.2 |
| sugar kinase | E5E93_08000 | Not Available | Negative | 1667104 - 1668192 | 40101.1 |
| deoxyribonuclease iv | E5E93_08005 | Not Available | Negative | 1668196 - 1669053 | 31493.3 |
| lysr family transcriptional regulator | E5E93_08015 | Not Available | Positive | 1670350 - 1671156 | 29997.4 |
| lysine-specific permease | E5E93_08020 | Not Available | Positive | 1671361 - 1672830 | 53579.0 |
| gtp cyclohydrolase i fole | E5E93_08035 | Not Available | Positive | 1676239 - 1676907 | 24832.1 |
| duf418 family protein | E5E93_08040 | Not Available | Positive | 1676924 - 1678081 | 43354.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





