Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | E5E93_07760 | Not Available | Negative | 1611233 - 1611736 | 18576.4 |
| valine--trna ligase | E5E93_07770 | Not Available | Negative | 1613181 - 1616036 | 108183.0 |
| dna polymerase iii subunit chi | E5E93_07775 | Not Available | Negative | 1616036 - 1616479 | 16574.5 |
| leucyl aminopeptidase | E5E93_07780 | Not Available | Negative | 1616833 - 1618344 | 54883.1 |
| lps export abc transporter permease lptf | E5E93_07785 | Not Available | Positive | 1618611 - 1619711 | 40360.1 |
| lps export abc transporter permease lptg | E5E93_07790 | Not Available | Positive | 1619711 - 1620793 | 39621.0 |
| duf853 domain-containing protein | E5E93_07795 | Not Available | Negative | 1620954 - 1622456 | 54255.4 |
| Trna-leu | Not Available | Not Available | Positive | 1622947 - 1623031 | Not Available |
| dna phosphorothioation-dependent restriction protein dpth | E5E93_07825 | Not Available | Positive | 1626535 - 1631616 | 192766.0 |
| Trna-pro | Not Available | Not Available | Positive | 1633652 - 1633728 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





