Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | E5E93_07540 | Not Available | Positive | 1562954 - 1563574 | 22217.5 |
| d-serine/d-alanine/glycine transporter | E5E93_07545 | Not Available | Positive | 1563883 - 1565295 | 51676.6 |
| iron-sulfur cluster repair protein ytfe | E5E93_07550 | Not Available | Negative | 1565340 - 1566002 | 24911.1 |
| dmt family transporter | E5E93_07555 | Not Available | Negative | 1566110 - 1567075 | 35279.7 |
| nad(p)h:quinone oxidoreductase | E5E93_07560 | Not Available | Negative | 1567184 - 1568044 | 29809.3 |
| transcriptional regulator | E5E93_07565 | Not Available | Positive | 1568133 - 1568513 | 14076.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | E5E93_07575 | Not Available | Positive | 1570776 - 1571516 | 27191.4 |
| ytfj family protein | E5E93_07580 | Not Available | Negative | 1571506 - 1572063 | 20617.9 |
| duf1107 domain-containing protein | E5E93_07585 | Not Available | Positive | 1572388 - 1572594 | 8072.24 |
| hlyc/corc family transporter | E5E93_07590 | Not Available | Negative | 1572655 - 1573998 | 49783.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





