Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | E5E93_15320 | Not Available | Positive | 3140713 - 3141024 | 12008.2 |
| Endolysin | E5E93_15325 | Not Available | Positive | 3141021 - 3141554 | 19663.6 |
| Phage-tail assembly-like protein | E5E93_15330 | Not Available | Positive | 3141551 - 3142048 | 18237.7 |
| Csp | E5E93_15335 | Not Available | Positive | 3142412 - 3142624 | 7684.14 |
| cold-shock protein | E5E93_15340 | Not Available | Positive | 3142635 - 3142823 | 7203.67 |
| hypothetical protein | E5E93_15345 | Not Available | Positive | 3142971 - 3143126 | 5657.77 |
| addiction module toxin, gnsa/gnsb family | E5E93_15350 | Not Available | Positive | 3143299 - 3143472 | 6608.09 |
| Hypothetical protein | E5E93_15355 | Not Available | Positive | 3143768 - 3143974 | 7680.15 |
| hypothetical | E5E93_15360 | Not Available | Negative | 3143953 - 3144173 | 8005.67 |
| Putative small terminase subunit | E5E93_15365 | Not Available | Positive | 3144525 - 3145064 | 20114.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





