Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blaec family class c beta-lactamase | E5E93_07245 | Not Available | Negative | 1510639 - 1511772 | 41474.7 |
| fumarate reductase subunit frdd | E5E93_07250 | Not Available | Negative | 1511835 - 1512194 | 13121.8 |
| fumarate reductase subunit frdc | E5E93_07255 | Not Available | Negative | 1512205 - 1512600 | 15015.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | E5E93_07260 | Not Available | Negative | 1512611 - 1513345 | 27124.5 |
| fumarate reductase (quinol) flavoprotein subunit | E5E93_07265 | Not Available | Negative | 1513338 - 1515146 | 65975.5 |
| elongation factor p--(r)-beta-lysine ligase | E5E93_07270 | Not Available | Positive | 1515470 - 1516447 | 36978.1 |
| miniconductance mechanosensitive channel mscm | E5E93_07280 | Not Available | Negative | 1518318 - 1521641 | 124005.0 |
| phosphatidylserine decarboxylase | E5E93_07285 | Not Available | Negative | 1521663 - 1522631 | 35936.4 |
| small ribosomal subunit biogenesis gtpase rsga | E5E93_07290 | Not Available | Negative | 1522728 - 1523780 | 39239.6 |
| oligoribonuclease | E5E93_07295 | Not Available | Positive | 1523875 - 1524420 | 20816.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





