Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase cada | E5E93_07135 | Not Available | Negative | 1489301 - 1491448 | 81278.7 |
| cadaverine/lysine antiporter | E5E93_07140 | Not Available | Negative | 1491528 - 1492862 | 46667.8 |
| hypothetical protein | E5E93_07145 | Not Available | Positive | 1493092 - 1493337 | 9324.27 |
| cadc family transcriptional regulator | E5E93_07150 | Not Available | Negative | 1493228 - 1494766 | 57830.1 |
| Trna-phe | Not Available | Not Available | Positive | 1495383 - 1495458 | Not Available |
| transcriptional regulator | E5E93_07160 | Not Available | Negative | 1495565 - 1496140 | 21932.3 |
| protein-disulfide reductase dsbd | E5E93_07165 | Not Available | Negative | 1496177 - 1497874 | 61834.6 |
| divalent cation tolerance protein cuta | E5E93_07170 | Not Available | Negative | 1497850 - 1498188 | 12331.7 |
| anaerobic c4-dicarboxylate transporter | E5E93_07175 | Not Available | Negative | 1498304 - 1499605 | 45753.5 |
| membrane protein fxsa | E5E93_07185 | Not Available | Positive | 1501497 - 1501973 | 17679.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





