Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i fumarate hydratase | E5E93_07085 | Not Available | Negative | 1478509 - 1480155 | 60078.7 |
| anaerobic c4-dicarboxylate transporter | E5E93_07090 | Not Available | Negative | 1480233 - 1481573 | 47938.2 |
| two-component system response regulator dcur | E5E93_07095 | Not Available | Negative | 1482146 - 1482865 | 27489.9 |
| two-component system sensor histidine kinase dcus | E5E93_07100 | Not Available | Negative | 1482862 - 1484493 | 60585.5 |
| 4fe-4s mono-cluster protein yjdi | E5E93_07105 | Not Available | Positive | 1484674 - 1484904 | 8650.47 |
| n-acetyltransferase | E5E93_07110 | Not Available | Positive | 1484916 - 1485188 | 10469.6 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | E5E93_07115 | Not Available | Positive | 1485415 - 1485711 | 11468.6 |
| type v toxin-antitoxin system toxin ghot | E5E93_07120 | Not Available | Positive | 1485739 - 1485912 | 6555.44 |
| lysine--trna ligase | E5E93_07125 | Not Available | Negative | 1486031 - 1487548 | 57829.9 |
| dipeptide/tripeptide permease dtpc | E5E93_07130 | Not Available | Negative | 1487785 - 1489242 | 53087.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





