Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpxt activity modulator pmrr | E5E93_07030 | Not Available | Positive | 1464941 - 1465030 | 3449.23 |
| two-component system sensor histidine kinase pmrb | E5E93_07035 | Not Available | Negative | 1465006 - 1466097 | 40924.7 |
| two-component system response regulator basr | E5E93_07040 | Not Available | Negative | 1466107 - 1466775 | 25002.3 |
| arginine/agmatine antiporter | E5E93_07050 | Not Available | Negative | 1468520 - 1469857 | 46845.3 |
| arac family transcriptional regulator | E5E93_07055 | Not Available | Negative | 1469995 - 1470756 | 29022.4 |
| arginine decarboxylase | E5E93_07060 | Not Available | Negative | 1471082 - 1473349 | 84470.9 |
| transcriptional regulator melr | E5E93_07065 | Not Available | Negative | 1473548 - 1474456 | 34929.9 |
| alpha-galactosidase | E5E93_07070 | Not Available | Positive | 1474739 - 1476094 | 50658.9 |
| melibiose:sodium transporter melb | E5E93_07075 | Not Available | Positive | 1476197 - 1477618 | 52627.5 |
| duf2238 domain-containing protein | E5E93_07080 | Not Available | Negative | 1477757 - 1478386 | 23352.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





