Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnh | E5E93_06975 | Not Available | Negative | 1453940 - 1454524 | 20971.5 |
| phosphonate c-p lyase system protein phng | E5E93_06980 | Not Available | Negative | 1454521 - 1454973 | 16553.7 |
| phosphonate metabolism transcriptional regulator phnf | E5E93_06985 | Not Available | Negative | 1454974 - 1455699 | 27623.1 |
| phosphonate abc transporter substrate-binding protein | E5E93_06995 | Not Available | Negative | 1456560 - 1457576 | 37404.6 |
| phosphonate abc transporter atp-binding protein | E5E93_07000 | Not Available | Negative | 1457601 - 1458389 | 29395.3 |
| voc family metalloprotein yjdn | E5E93_07005 | Not Available | Negative | 1458522 - 1458965 | 16156.2 |
| phna family protein | E5E93_07010 | Not Available | Negative | 1459223 - 1459558 | 12345.7 |
| clamp-binding protein crfc | E5E93_07015 | Not Available | Positive | 1460047 - 1462188 | 80677.4 |
| hypothetical protein | E5E93_07020 | Not Available | Positive | 1462185 - 1463063 | 32903.7 |
| glycine betaine/l-proline transporter prop | E5E93_07025 | Not Available | Positive | 1463327 - 1464829 | 54836.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





