Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate transporter | E5E93_06780 | Not Available | Negative | 1410899 - 1412215 | 47742.1 |
| paar domain-containing protein | E5E93_06800 | Not Available | Negative | 1422956 - 1423237 | 9496.79 |
| hypothetical protein | E5E93_06805 | Not Available | Negative | 1423266 - 1423520 | 9971.03 |
| hypothetical protein | E5E93_06810 | Not Available | Negative | 1423480 - 1424451 | 36713.2 |
| type vi secretion system tip protein vgrg | E5E93_06815 | Not Available | Negative | 1425365 - 1427479 | 79067.9 |
| type vi secretion system baseplate subunit tssf | E5E93_06820 | Not Available | Positive | 1427784 - 1429643 | 71027.7 |
| type vi secretion system baseplate subunit tssg | E5E93_06825 | Not Available | Positive | 1429607 - 1430668 | 40105.6 |
| transcriptional regulator | E5E93_06835 | Not Available | Positive | 1431461 - 1431715 | 9601.4 |
| addiction module antidote protein, higa family | E5E93_06840 | Not Available | Positive | 1431864 - 1432136 | 9941.08 |
| hypothetical protein | E5E93_06855 | Not Available | Positive | 1434298 - 1434501 | 7204.95 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





