Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-gdp ribazoletransferase | E5E93_06725 | Not Available | Positive | 1400633 - 1401376 | 26397.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | E5E93_06730 | Not Available | Positive | 1401388 - 1402467 | 36918.2 |
| l,d-transpeptidase | E5E93_06735 | Not Available | Positive | 1402529 - 1403464 | 34463.3 |
| Trna-asn | Not Available | Not Available | Positive | 1403520 - 1403595 | Not Available |
| nitrogen assimilation transcriptional regulator | E5E93_06745 | Not Available | Positive | 1403921 - 1404838 | 32790.9 |
| hth-type transcriptional regulator cbl | E5E93_06750 | Not Available | Positive | 1404940 - 1405890 | 35884.1 |
| Trna-asn | Not Available | Not Available | Positive | 1405929 - 1406004 | Not Available |
| toxic metabolite efflux mate transporter yeeo | E5E93_06760 | Not Available | Positive | 1406009 - 1407652 | 60028.0 |
| Trna-asn | Not Available | Not Available | Positive | 1407753 - 1407828 | Not Available |
| yebc/pmpr family dna-binding transcriptional regulator | E5E93_06770 | Not Available | Negative | 1408284 - 1409000 | 25868.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





