Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | E5E93_06655 | Not Available | Positive | 1389122 - 1389946 | 29701.8 |
| membrane protein yoei | E5E93_06665 | Not Available | Positive | 1391137 - 1391199 | 2241.66 |
| putrescine/proton symporter plap | E5E93_06670 | Not Available | Positive | 1391189 - 1392547 | 49540.5 |
| yeee/yede family protein | E5E93_06675 | Not Available | Positive | 1392823 - 1393785 | 34562.1 |
| hypothetical protein | E5E93_06680 | Not Available | Positive | 1393799 - 1394026 | 8092.61 |
| dna gyrase inhibitor sbmc | E5E93_06695 | Not Available | Positive | 1396991 - 1397464 | 18068.3 |
| fusc family protein | E5E93_06700 | Not Available | Positive | 1397662 - 1398720 | 39957.7 |
| duf496 family protein | E5E93_06705 | Not Available | Positive | 1398892 - 1399221 | 12778.5 |
| cobalamin biosynthesis protein | E5E93_06715 | Not Available | Positive | 1399597 - 1399956 | 12966.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | E5E93_06720 | Not Available | Positive | 1400091 - 1400636 | 20106.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





