Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1482 family protein | E5E93_15220 | Not Available | Negative | 3128679 - 3128870 | 6815.23 |
| cell division inhibition protein dicb | E5E93_15225 | Not Available | Negative | 3128867 - 3129055 | 6964.7 |
| hypothetical protein | E5E93_15230 | Not Available | Negative | 3129542 - 3130117 | 22335.3 |
| Hypothetical protein | E5E93_15235 | Not Available | Negative | 3130119 - 3130274 | 5792.63 |
| Putative transcriptional repressor dica | E5E93_15240 | Not Available | Negative | 3130468 - 3130875 | 15336.2 |
| Regulatory protein cro (antirepressor) | E5E93_15245 | Not Available | Positive | 3130953 - 3131180 | 8433.88 |
| Putative cii repressor | E5E93_15250 | Not Available | Positive | 3131164 - 3131685 | 19909.8 |
| Replication protein | E5E93_15255 | Not Available | Positive | 3131666 - 3132631 | 36952.9 |
| Lygf | E5E93_15260 | Not Available | Positive | 3132672 - 3133094 | 16288.9 |
| hypothetical | E5E93_15265 | Not Available | Positive | 3133511 - 3134471 | 34209.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





