Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna uptake porin hofq | E5E93_05810 | Not Available | Negative | 1194210 - 1195448 | 44718.9 |
| dna utilization protein hofp | E5E93_05815 | Not Available | Negative | 1195360 - 1195764 | 15099.1 |
| dna utilization protein hofo | E5E93_05820 | Not Available | Negative | 1195754 - 1196194 | 16829.1 |
| dna utilization protein hofn | E5E93_05825 | Not Available | Negative | 1196178 - 1196717 | 20797.1 |
| dna utilization protein hofm | E5E93_05830 | Not Available | Negative | 1196717 - 1197496 | 28982.8 |
| peptidoglycan glycosyltransferase/peptidoglycan dd-transpeptidase mrca | E5E93_05835 | Not Available | Positive | 1197616 - 1200168 | 93611.4 |
| adp compounds hydrolase nude | E5E93_05840 | Not Available | Negative | 1200333 - 1200893 | 21154.4 |
| intracellular growth attenuator protein igaa | E5E93_05845 | Not Available | Positive | 1201213 - 1203348 | 79444.4 |
| gmp/imp nucleotidase | E5E93_05850 | Not Available | Positive | 1203413 - 1204081 | 25400.2 |
| ribosome-associated heat shock protein hsp15 | E5E93_05855 | Not Available | Positive | 1204092 - 1204493 | 15514.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





