Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial adhesin ecpd | E5E93_05560 | Not Available | Positive | 1147054 - 1148697 | 60038.2 |
| hypothetical protein | E5E93_05565 | Not Available | Positive | 1148666 - 1149376 | 26650.7 |
| ykgj family cysteine cluster protein | E5E93_05570 | Not Available | Positive | 1149689 - 1150018 | 11799.1 |
| aldehyde dehydrogenase iron-sulfur subunit | E5E93_05580 | Not Available | Positive | 1151297 - 1151986 | 24356.1 |
| xanthine dehydrogenase family protein subunit m | E5E93_05585 | Not Available | Positive | 1151983 - 1152939 | 33889.8 |
| hypothetical protein | E5E93_05600 | Not Available | Positive | 1156081 - 1156491 | 15495.9 |
| Trna-thr | Not Available | Not Available | Positive | 1156618 - 1156693 | Not Available |
| glutamate-5-semialdehyde dehydrogenase | E5E93_05610 | Not Available | Negative | 1156808 - 1158061 | 44662.7 |
| glutamate 5-kinase | E5E93_05615 | Not Available | Negative | 1158073 - 1159176 | 39058.9 |
| phosphoporin phoe | E5E93_05620 | Not Available | Positive | 1159464 - 1160519 | 38968.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





