Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | E5E93_05505 | Not Available | Positive | 1137860 - 1138780 | 33267.6 |
| nadh-dependent flavin oxidoreductase | E5E93_05510 | Not Available | Positive | 1139015 - 1140157 | 41864.2 |
| hypothetical protein | E5E93_05515 | Not Available | Positive | 1140631 - 1140732 | 3999.01 |
| type b 50s ribosomal protein l31 | E5E93_05520 | Not Available | Positive | 1141095 - 1141358 | 9936.71 |
| 50s ribosomal protein l36 | E5E93_05525 | Not Available | Positive | 1141358 - 1141498 | 5466.94 |
| hypothetical protein | E5E93_05530 | Not Available | Negative | 1141533 - 1141760 | 8839.47 |
| hypothetical protein | E5E93_05535 | Not Available | Positive | 1142117 - 1142338 | 8738.81 |
| ecp biosynthesis operon dna-binding transcriptional regulator ecpr | E5E93_05540 | Not Available | Positive | 1142584 - 1143126 | 21232.7 |
| common pilus major fimbrillin subunit ecpa | E5E93_05545 | Not Available | Positive | 1143201 - 1143788 | 20112.5 |
| fimbrial chaperone ecpb | E5E93_05550 | Not Available | Positive | 1143846 - 1144514 | 24518.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





