Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate synthase | E5E93_05295 | Not Available | Negative | 1084900 - 1086069 | 43105.6 |
| methylisocitrate lyase | E5E93_05300 | Not Available | Negative | 1086114 - 1087004 | 32123.5 |
| propionate catabolism operon regulatory protein prpr | E5E93_05305 | Not Available | Positive | 1087243 - 1088829 | 58706.0 |
| duf1471 domain-containing protein | E5E93_05310 | Not Available | Negative | 1088930 - 1089205 | 9929.94 |
| Trna-pseudo | Not Available | Not Available | Positive | 1090275 - 1090355 | Not Available |
| hypothetical protein | E5E93_05320 | Not Available | Negative | 1090040 - 1090285 | 8818.93 |
| hypothetical protein | E5E93_05325 | Not Available | Negative | 1090697 - 1091512 | 31847.5 |
| nadph-dependent aldehyde reductase yahk | E5E93_05330 | Not Available | Negative | 1091755 - 1092804 | 37968.6 |
| abc transporter permease | E5E93_05335 | Not Available | Negative | 1092891 - 1093847 | 33797.9 |
| abc transporter permease | E5E93_05340 | Not Available | Negative | 1093844 - 1094815 | 34929.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





