Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxd | E5E93_05130 | Not Available | Negative | 1049913 - 1050971 | 38138.4 |
| hypothetical protein | E5E93_05135 | Not Available | Negative | 1050972 - 1051258 | 10174.9 |
| pig-l family deacetylase | E5E93_05140 | Not Available | Positive | 1051475 - 1052026 | 20236.4 |
| hypothetical protein | E5E93_05145 | Not Available | Negative | 1051998 - 1052132 | 5042.44 |
| glycosyltransferase family 2 protein | E5E93_05150 | Not Available | Positive | 1052157 - 1053353 | 44715.0 |
| acetyltransferase | E5E93_05155 | Not Available | Positive | 1053331 - 1053912 | 20734.3 |
| yaio family outer membrane beta-barrel protein | E5E93_05160 | Not Available | Positive | 1053914 - 1054687 | 29038.8 |
| formaldehyde-responsive transcriptional repressor frmr | E5E93_05165 | Not Available | Positive | 1054875 - 1055150 | 10318.3 |
| s-(hydroxymethyl)glutathione dehydrogenase | E5E93_05170 | Not Available | Positive | 1055185 - 1056294 | 39335.2 |
| duf2058 domain-containing protein | E5E93_05180 | Not Available | Negative | 1057347 - 1057886 | 19923.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





