Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator slya | E5E93_05070 | Not Available | Positive | 1039289 - 1039723 | 16354.0 |
| outer membrane lipoprotein slyb | E5E93_05075 | Not Available | Negative | 1039770 - 1040237 | 15602.7 |
| anhydro-n-acetylmuramic acid kinase | E5E93_05080 | Not Available | Positive | 1040511 - 1041620 | 39506.6 |
| c-type lysozyme inhibitor | E5E93_05085 | Not Available | Positive | 1041718 - 1042047 | 12495.2 |
| pyridoxamine 5'-phosphate oxidase | E5E93_05090 | Not Available | Positive | 1042106 - 1042762 | 25560.6 |
| tyrosine--trna ligase | E5E93_05095 | Not Available | Positive | 1042891 - 1044165 | 47529.6 |
| glutathione transferase gsta | E5E93_05105 | Not Available | Negative | 1045132 - 1045737 | 22869.6 |
| dipeptide/tripeptide permease dtpa | E5E93_05110 | Not Available | Negative | 1045843 - 1047345 | 54008.4 |
| electron transport complex subunit e | E5E93_05120 | Not Available | Negative | 1048590 - 1049285 | 24460.5 |
| electron transport complex subunit rsxg | E5E93_05125 | Not Available | Negative | 1049289 - 1049909 | 21913.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





